BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB024E06SP1|AL428229
(1015 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1290 1930 0.0
>3x_Contig1290
Length = 6501
Score = 1930 bits (968), Expect = 0.0
Identities = 1005/1018 (98%), Gaps = 4/1018 (0%)
Strand = Plus / Minus
Query: 1 gatcaaaacttagtttgtaataagtcattttgaactttatatagaaataaagaaacaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2889 gatcaaaacttagtttgtaataagtcattttgaactttatatagaaataaagaaacaaag 2830
Query: 61 aagagaaagacagatatatcgcagaaaacgtacacagtaaaggcagtggaaagacactgg 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2829 aag-gaaagacagatatatcgcagaaaacgtacacagtaaaggcagtggaaagacactgg 2771
Query: 121 tgcttggtggaacggttttaagaaaacgctcgttaagtgcaaatmagatatgattggtta 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 2770 tgcttggtggaacggttttaagaaaacgctcgttaagtgcaaataagatatgattggtta 2711
Query: 181 tgagtcaatgggaggttttttttttgatggtcagtaagataatagtggtgatagctaggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2710 tgagtcaatgggaggttttttttttgatggtcagtaagataatagtggtgatagctaggt 2651
Query: 241 agtaagtagatcgtggatgttccggataagagtgtatagcagacgttgtgaaacgtcaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2650 agtaagtagatcgtggatgttccggataagagtgtatagcagacgttgtgaaacgtcaga 2591
Query: 301 ggaggaagacaaagttagatattagttgtagcggtgttttggttttagccatatttmcgt 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 2590 ggaggaagacaaagttagatattagttgtagcggtgttttggttttagccatatttacgt 2531
Query: 361 attatataggcaaacataggtatgagagattaaaccgtagtgcggtagcagatgtgcagt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2530 attatataggcaaacataggtatgagagattaaaccgtagtgcggtagcagatgtgcagt 2471
Query: 421 tgcagctgcagcts-aaagaaggccaagggatgatgatctattggmatggggggtagaat 479
||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 2470 tgcagctgcagctgcaaagaaggccaagggatgatgatctattggaatggggggtagaat 2411
Query: 480 tgttgttggtactgttgtggttgttggtattgcatttgttgtwactgttgttgctgcagg 539
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 2410 tgttgttggtactgttgtggttgttggtattgcatttgttgtaactgttgttgctgcagg 2351
Query: 540 agctgttgctgttgctgctgttgtagctgctgttgttgtagcagttgctgttgctgctgt 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2350 agctgttgctgttgctgctgttgtagctgctgttgttgtagcagttgctgttgctgctgt 2291
Query: 600 tgttggtcctgctgttgtttttggagattcaggatctgttggtattgtggattatccggt 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2290 tgttggtcctgctgttgtttttggagattcaggatctgttggtattgtggattatccggt 2231
Query: 660 ttgatttctacggcactagaatataaatctggtctttgatacagtgataatagtgtgttc 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2230 ttgatttctacggcactagaatataaatctggtctttgatacagtgataatagtgtgttc 2171
Query: 720 ttatctatcgatggttgagcagtgaattgaggctgtacctgttgggtgaactgaggttgt 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2170 ttatctatcgatggttgagcagtgaattgaggctgtacctgttgggtgaactgaggttgt 2111
Query: 780 aattgctgtgtgaattggggttgcacttgttgtgtaaactgaggttgaacctgttgtgt- 838
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2110 aattgctgtgtgaattggggttgcacttgttgtgtaaactgaggttgaacctgttgtgta 2051
Query: 839 aactgaggttgaacttgttgtgccaatgcttgtacctgggyctgctgcattgccgcatag 898
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 2050 aactgaggttgaacttgttgtgccaatgcttgtacctgggcctgctgcattgccgcatag 1991
Query: 899 gagttttgatctacataaatttggccggtagttggatcatagtattgttgtw-cccmtcg 957
||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 1990 gagttttgatctacataaatttggccggtagttggatcatagtattgttgtaccccatcg 1931
Query: 958 aatactgctgggcgaggttctgccgatgctgtactargtaggcttggttcacttgttc 1015
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 1930 aatactgctgggcgaggttctgccgatgctgtactaggtaggcttggttcacttgttc 1873
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8919
Number of Sequences: 1807
Number of extensions: 8919
Number of successful extensions: 409
Number of sequences better than 1.0e-20: 1
length of query: 1015
length of database: 10,358,551
effective HSP length: 16
effective length of query: 999
effective length of database: 10,329,639
effective search space: 10319309361
effective search space used: 10319309361
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)